Data Analysis Workstations

The CGS has 4 PC user workstations for genomics and proteomics analysis of data generated at the CGS in Room 6-01.

Users of CGS technology platforms can make reservations for these workstations at the CGS reception (Room 6-02) during office hours or via our Online Resource Booking System (ORBS).

Software introductory sessions are available. Please contact our platform specialists accordingly.

Analysis software available at CGS:

Software Area of usage User PC #2 Workstation * User PC #3 Workstation User PC #5 Workstation User PC #7 Workstation
Proteomics Data Analysis
Data Explorer 4.7 Mass Spectrometry   available    
Genomics Data Analysis
Genome Studio iScan      available  
GeneMapper 3.7 Genescan available      
PyroQ-CpG 1.0.9 Pyrosequencing-methylation available      
PyroMark Assay Design 2.0 Pyrosequencing–assay design   available    
RQ Manager 1.2 Real-time PCR available available    
SDS 2.4 Real-time PCR available available    
LightCycler 480 SW 1.5.1 LC480 Real-time PCR     available  
SeqScape 2.5.0 DNA sequencing   available    
Sequence Scanner DNA sequencing available available    
Peak Scanner 2 DNA sequencing available available    
Agilent 2100 Expert Bioanalyzer   available    
Microarray Data Analysis
Partek Genomics Suite 6.6 with Partek Pathway Microarray       available
Expression Console 1.4.1 Affymetrix Expression array   available available  
Genotyping Console 4.2 Affymetrix Genotyping array     available  
Chromosome Analysis Suite 3.1 Cytogenetics array     available  
Transcriptome Analysis Console
(TAC) 3.0 Software
Affymetrix Expression array     available  
Next Generation Sequencing Data Analysis
CLCBio Genomics Workbench 7.0 Illumina and Roche 454 datasets       available
Partek Genomics Suite 6.6 with Partek Pathway Illumina and Roche 454 datasets       available

* This user PC is operating in Microsoft Windows XP platform with NO internet connection